• UNIT 6 CELLULAR RESPIRATION

    UNIT 6: CELLULAR RESPIRATION
    Key Unit Competence
    To be able to describe the process of cellular respiration
    Learning objectives
    By the end of this unit, I should be able to:
    – Outline the four stages in aerobic respiration (glycolysis, link reaction, TCA cycle
        and oxidative phosphorylation) and state where each occurs in the eukaryotic
         cells.
    – Explain that when oxygen is available, pyruvate is converted into acetyl
        coenzyme A, which then combines with oxaloacetate (4C) to form citrate (6C).
    – Explain that reactions in the TCA cycle involve decarboxylation and
        dehydrogenation and the reduction of NAD and FAD.
    – Outline the process of oxidative phosphorylation including the role of oxygen
        (details of the carriers are not required).
    – Describe the relationship between the structure and function of the
        mitochondrion.
    – Explain the production of a small yield of ATP from anaerobic respiration in
        yeast and mammalian muscle tissue, including the concept of oxygen debt.

    – Explain how other substrates are involved in glycolysis and the TCA cycle.

    Introductory activity
    Use of books from your library and search further information on the internet
    and answer the following questions. The person in the picture below is using

    energy.

    1. Where is the energy used by the person in the picture coming from?
    2. All living organisms need a continuous supply of energy. Explain why.
    3. Identify the processes exhibited by the person on the picture that
    consume too much energy if compared with another one who is at rest.

    4. How is the energy produced in our body?

    6.1 Overview of respiration process

    6.1.1 Respiration

    Activity 6.1.1
    With the help of textbooks and simulations of the process of respiration,
    answer the questions that follow:
    1. Differentiate between glucose and pyruvate.

    2. What is the role of glycolysis?

    Cellular respiration is the complex process in which cells make adenosine
    triphosphate (ATP) by breaking down organic molecules. The energy stored in
    ATP can then be used to drive processes requiring energy, including biosynthesis,
    locomotion or transportation of molecules across cell membranes. The main fuel
    for most cells is carbohydrate, usually glucose which is used by most of the cells as
    respiratory substrate. Some other cells are able to break down fatty acids, glycerol
    and amino acids.
    Glucose breakdown can be divided into four stages: glycolysis, the link reaction, the

    Krebs cycle and oxidative phosphorylation.

    6.1.2 Glycolysis

    Activity 6.1.2
    With the help of textbooks and simulations from internet / YouTube observe
    the process of respiration, answer the questions that follow:
    1. Observe and note the stages of the process of respiration.

    2. Draw the structure of a glucose molecule.

    Glycolysis is the splitting or lysis of a glucose molecule. It is a multi-step process
    in which a glucose molecule with six carbon atoms is eventually split into two
    molecules of pyruvate, each with three carbon atoms. Energy from ATP is needed in
    the first steps, and it is released in the later steps to synthesize ATP. There is a net gain
    of two ATP molecules per molecule of glucose broken down.
    Glycolysis takes place in the cytoplasm of a cell. Glucose enters the cell and is
    phosphorylated by the enzyme called hexokinase, which transfers a phosphate
    group from ATP to the sugar. The ATP used in this process has 2 advantages: the
    charge of the phosphate group traps the sugar in the cell because the plasma
    membrane is impermeable to large ions. Phosphorylation also makes glucose more

    chemically reactive. Even though glycolysis consumes two ATP molecules,

    It produces a gross of four ATP molecules (4 ATP), and a net gain of two ATP (2 ATP)
    molecules for each glucose molecule that is oxidized. Glycolysis results in a net gain

    of two ATP, two NADH and two pyruvate molecules.

                                                                         Figure 6.1: Reactions of glycolysis

    Applicatioin 6.1
    1. Why is ATP needed for glycolysis?
    2. How many gross ATP molecules are produced during glycolysis of one
         glucose molecule?

    3. How many NADH are made during glycolysis?

    6.2 Link reaction and the Krebs cycle

    Activity 6.2
    Use the books from the school library and search further information on the
    internet. Then:
    1. Observe and write the number of carbon atoms in an acetyl-coA molecule.
    2. Use the chemical equation to show the conversion of pyruvate into acetyl-
           coA.

    3. Observe and note the main products of the Krebs cycle from one glucose

         molecule

    6.2.1 Link reaction
    Pyruvate, the end product of glycolysis is oxidized to Acetyl-CoA by enzymes located
    in the mitochondrion of eukaryotic cells as well as in the cytoplasm of prokaryotes.
    In the conversion of pyruvate to Acetyl-CoA, one molecule of NADH and one
    molecule of CO2 are formed (Figure 6.2). This step is also known as the link reaction

    or transition step, as it links glycolysis to the Krebs cycle.

           Figure 6.2: Link reaction between glycolysis and Krebs cycle

    6.2.2 The Krebs cycle (Citric acid cycle)
    The coenzyme has a sulphur atom, which attaches the acetyl fragment by an
    unstable bond. This activates the acetyl group for the first reaction of the Krebs cycle
    also called citric acid cycle or Tricarboxylic Acid Cycle (TCA). It is also known as the
    citric acid cycle, because the first molecule formed when an acetyl group joins the
    cycle. When oxygen is present, the mitochondria will undergo aerobic respiration

    which leads to the Krebs cycle.

    In the presence of oxygen, when acetyl-CoA is produced, the molecule then enters
    the citric acid cycle inside the mitochondrial matrix, and gets oxidized to CO2 while
    at the same time reducing NAD+ to NADH. NADH can then be used by the electron
    transport chain to create more ATP as part of oxidative phosphorylation. For the
    complete oxidation of one glucose molecule, two Acetyl-CoA must be metabolized
    by the Krebs cycle. Two waste products namely H2O and CO2, are released during

    this cycle.

    The citric acid cycle is an 8-step process involving different enzymes and co-enzymes.
    Throughout the entire cycle, Acetyl-CoA (2 carbons) combines with oxaloacetate (4
    carbons) to produce citrate. Citrate (6 carbons) is rearranged to a more reactive form
    called iso citrate (6 carbons). Iso citrate (6 carbons) is modified to α-Ketoglutarate (5
    carbons), Succinyl-CoA, Succinate, Fumarate, Malate, and finally to Oxaloacetate. The
    net energy gain from one cycle is 3 NADH, 1 FADH2, and 1 Guanosine Triphosphate
    (GTP). The GTP may subsequently be used to produce ATP. Thus, the total energy
    yield from one whole glucose molecule (2 pyruvate molecules) is 6 NADH, 2 FADH2,
    and 2 ATP. 2 molecules of carbon dioxide are also produced in one cycle (for a total

    of 4 molecules of carbon dioxide from one glucose molecule).

                                                                                           Figure 6.3: The Krebs cycle

    Application 6.2
    1. In which part of the cell does the Krebs cycle take place?
    2. How many ATP molecules are generated by each revolution of the Krebs
         cycle?

    3. Which six carbon sugar is formed in the first reaction of the Krebs cycle?

    6.3 Oxidative phosphorylation and electron transport chain
    Activity 6.3
    Download and watch a movie of the electron transport chain from internet /
    you tube. Make a simulation of it in the following way.
    – In a line, move warm stones from one area to another.
    – Take the first stone and passes it to the second up to the last one.
    – The last one will have a bucket where the last stone is thrown.
    – Compare what we’re doing to what you watched in the movie (carriers of
         electrons)
    Write short notes and share information on how the electron transport chain

    takes place.

    In the final stage of aerobic respiration known as the oxidative phosphorylation,
    the energy for the phosphorylation of ADP to ATP comes from the activity of the
    electron transport chain. Oxidative Phosphorylation is the production of ATP using
    energy derived from the redox reactions of an electron transport chain.

    In eukaryotes, oxidative phosphorylation occurs in the mitochondrial cristae. It
    comprises the electron transport chain that establishes a proton gradient across
    the inner membrane by oxidizing the NADH produced from the Krebs cycle. ATP is
    synthesized by the ATP synthase enzyme when the chemiosmotic gradient is used to
    drive the phosphorylation of ADP. Chemiosmosis is the production of ATP from ADP
    using the energy of hydrogen ion gradients. The electrons are finally transferred to
    oxygen and, with the addition of two protons, water is formed. The average ATP yield
    per NADH is probably 3 and for FADH2 of this electron carrier is worth a maximum of

    only two molecules of ATP.


                                                                    Figure 6.4: The electron transport chain

    The role of oxygen in chemiosmosis
    ATP can be synthesized by chemiosmosis only if electrons continue to move from
    molecule to molecule in the electron transport chain. Oxygen serves as the final
    acceptor of electrons. By accepting electrons from the last molecule in the electron
    transport chain, and allows additional electrons to pass along the chain. As a result,
    ATP can continue to be synthesized. Oxygen also accepts the protons that were once
    part of the hydrogen atoms supplied by NADH and FAD2. By combining with both

    electrons and protons, oxygen forms water as shown in the following equation:


    Overview of cellular respiration

    A considearable number of ATP is produced during oxidative phosphorylmation
    and it is estimated between 32 and 34 ATPs. These are added to 2 ATP produced
    during glycolysis and 2 ATP produced during citric cycle. The total number of ATP
    produced during a complete respiration process for one molecule of glucose is then

    estimated between 36 and 38 ATPs.

                                                                        Figure 6.5: Overview of cellular respiration

    Note that the amount of ATP produced from glucose is usually less than 38 ATP for
    the following reasons: some ATP is used to transport pyruvate from the cytoplasm
    into the mitochondria and some energy is used to transport NADH produced in

    glycolysis from the cytoplasm into the cristae of mitochondria.

    Application 6.3
    1. What is the importance of NADH and FADH?
    2. How many ATP are formed from 1 NADH?
    3. How many ATP are formed from 1 FADH?
    4. How many ATP are formed after a complete oxidation of one glucose

         molecule?

    6.4 Efficiency of aerobic and anaerobic respiration
    Activity 6.4
    Visit a nearby bakery and observe how bread is made and answer to the
    following questions. Use also books, internet and prior knowledge from
    chemistry.
    1. On a sheet of paper write down the ingredients used to manufacture
        bread
    2. Which ingredients make the bread rise?
    3. What do you understand by anaerobic respiration?
    4. State the examples of the applications of anaerobic respiration in
         everyday life?
    5. Give a table comparing aerobic to anaerobic respiration
    6. How can the efficiency of anaerobic and aerobic respiration be
    calculated from one glucose molecule?
    7. Between aerobic and anaerobic respiration, which one do you think is

        more efficient? and why?

    Without oxygen, pyruvate (pyruvic acid) is not metabolized by cellular respiration
    but undergoes a process of fermentation. The pyruvate is not transported into
    the mitochondrion, but remains in the cytoplasm, where it is converted to waste
    products that may be removed from the cell. This serves the purpose of oxidizing the
    electron carriers so that they can perform glycolysis again and removing the excess
    pyruvate. Fermentation oxidizes NADH to NAD+ so it can be re-used in glycolysis.

    In the absence of oxygen, fermentation prevents the build-up of NADH in the
    cytoplasm and provides NAD+ for glycolysis. This waste product varies depending
    on the organism. In skeletal muscles, the waste product is lactic acid. This type
    of fermentation is called lactic acid fermentation. In yeast and plants, the waste
    products are ethanol and carbon dioxide. This type of fermentation is known as
    alcoholic or ethanol fermentation. The ATP generated in this process is made by

    substrate-level phosphorylation, which does not require oxygen.

                                             Figure 6.6: Alcoholic and lactic fermentation

    Fermentation is less efficient at using the energy from glucose since only 2 ATP are
    produced per glucose, compared to the 38 ATP per glucose produced by aerobic
    respiration. This is because the waste products of fermentation still contain plenty

    of energy. Glycolytic ATP, however, is created more quickly.

    a. Applications of anaerobic respiration
    Some food products and drinks are produced by using anaerobic microorganisms:
    – Production of beer
    – Production of wine
    – Production of yoghurt
    – Production of cheese

    – Production of bread

    b. Efficiency of aerobic and anaerobic respiration
    The complete oxidation of glucose produces the energy estimated at 686 Kcal.
    Under the condition that exists inside most of the cells, the production of a
    standard amount of ATP from ADP absorbs about 7.3 Kcal. Glucose molecule can
    generate up to 38 ATP molecules in aerobic respiration. The efficiency of aerobic

    respiration (EAER) is calculated as follows:

    This result indicates that the efficiency of aerobic respiration equals 40%. The remain
    of the energy (around 60%) is lost from the cell as heat.
    Due to the fact that anaerobic respiration produces only 2 ATP, the efficiency of

    anaerobic respiration is less than that of aerobic respiration. It is calculated as follows:

    c. Oxygen debt
    Standing still, the person absorbs oxygen at the resting rate of 0.2 dm3 min−1. (This
    is a measure of the person’s metabolic rate.) When exercise begins, more oxygen is
    needed to support aerobic respiration in the person’s muscles, increasing the overall
    demand to 2.5 dm3 min−1. However, it takes four minutes for the heart and lungs to
    meet this demand, and during this time lactic fermentation occurs in the muscles.
    Thus the person b-uilds up an oxygen deficit. For the next three minutes, enough
    oxygen is supplied. When exercise stops, the person continues to breathe deeply
    and absorb oxygen at a higher rate than when at rest. This post-exercise uptake of
    extra oxygen, which is ‘paying back’ the oxygen deficit, is called the oxygen debt.
    The oxygen is needed for:
    – Conversion of lactate to glycogen in the liver
    – Re oxygenation of haemoglobin in the blood
    – A high metabolic rate, as many organs are operating at above resting levels.
    The presence of the lactic acid is sometimes described as an ‘ oxygen debt’. This is
    because significant quantities of lactic acid can only be removed reasonably quickly
    by combining with oxygen. However, the lactic acid was only formed due to lack
    of sufficient oxygen to release the required energy to the muscle tissue via aerobic
    respiration. Lactic acid can accumulate in muscle tissue that continues to be overworked.
    Eventually, so much lactic acid can build-up that the muscle ceases working
    until the oxygen supply that it needs has been replenished.
    To repay such an oxygen debt, the body must take in more oxygen in order to get rid

    of the additional unwanted waste product lactic acid.

    d. Muscle cramps
    A muscle cramp is an involuntarily and forcibly contracted muscle that does not
    relax. Muscle cramps can occur in any muscle; cramps of the leg muscles and feet
    are particularly common.
    Almost everyone experiences a muscle cramp at some time in their life. There are
    a variety of types and causes of muscle cramps. Muscle cramps may occur during
    exercise, at rest, or at night, depending upon the exact cause.
    Overuse of a muscle, dehydration, muscle strain or simply holding a position for a
    prolonged period can cause a muscle cramp. In many cases, however, the cause isn’t
    known.
    Although most muscle cramps are harmless, some may be related to an underlying
    medical condition, such as:
    – Inadequate blood supply. Narrowing of the arteries that deliver blood to your
        legs (arteriosclerosis of the extremities) can produce cramp-like pain in your
        legs and feet while you’re exercising. These cramps usually go away soon after
        you stop exercising.
    – Nerve compression. Compression of nerves in your spine (lumbar stenosis) also
        can produce cramp-like pain in your legs. The pain usually worsens the longer
        you walk. Walking in a slightly flexed position such as you would use when
        pushing a shopping cart ahead of you may improve or delay the onset of your
        symptoms.
    – Mineral depletion. Too little potassium, calcium or magnesium in your diet can
        contribute to leg cramps. Diuretics or medications often prescribed for high

        blood pressure also can deplete these minerals.

    Application 6.4
    1. What is the product of anaerobic respiration in animal cells?
    2. Under which conditions can anaerobic respiration take place in animal
         cells?
    3. Calculate the efficiency of anaerobic and aerobic respiration, when
         a complete oxidation of glucose produce the energy estimated at
         500Kcal under a production of a standard amount of ATP from ADP

         absorbed is about 7.3 Kcal.

    6.5 Factors affecting the rate of respiration

    Activity 6.5

    Observe carefully the pictures below and answer the questions that follow;

    1. Make a short report on the respiration rate of the person on the picture A
         and that of the person on the picture B.
    2. Which one between person A and that of person B has a high respiration
        rate?
    3. What are factors could show that the respiration rate has increased in the

        person on the picture A above?

    Cellular respiration is the process of conversion of chemical energy stored in the food
    to ATP or higher energy compounds. The factors that affect the cellular respiration

    are:

    a. Amount of nutrients
    If the amount of nutrients is high, then the energy is high in the cellular respiration.
    The nutrients which can go through cellular respiration and transform into energy
    are fat, proteins and carbohydrates. The amount of nutrients available to transform
    into energy depend upon the diet of the person.
    b. Temperature
    The rate of the cellular respiration increases if the body temperature is warmer. The
    lower the temperature, the slower the rate of cellular respiration. The reason for
    this is enzymes which are present in cellular respiration process. Enzyme reactions
    require optimum temperatures.
    c. State of the cell
    Metabolically active cells such as neurons, root of human hair have higher
    respiration rate than the dormant cells such as skin cells and bone cells. This is
    because metabolically active cells can store energy in the body because of the many
    metabolic reactions that take place in them.
    d. Water
    It is the medium where the reaction happens. When a cell is dehydrated the
    respiration and other metabolism decreases.
    e. Cellular activity
    Some cells need more energy than others. For example, growing cells or very active
    cells such as neurons need a lot of energy.
    f. O2 /CO2 content
    Higher O2 and lower CO2 make higher respiration rates.
    g. ATP/ADP range
    When there is more ATP than ADP, respiration rate slows down to avoid excess of

    ATP

    Application 6.5
    1. Which cells in the human body have a high respiration rate?

    2. Explain how the temperature affects the rate of respiration.

    6.6 Use of other substrates in respiration
    Activity 6.6
    When one has eaten carbohydrates such as cassava and sweet potatoes you
    do not feel hungry in the same time as another one who has consumed milk
    or cheese.
    1. Can you suggest the reason for this?

    2. Which one can take a short time for digestion and why?

    Carbohydrates are the first nutrients that most organisms can catabolise for energy.
    In some cases, living things must be able to metabolize other energy-rich nutrients
    to obtain energy in times of starvation. Most organisms possess metabolic pathways
    that, when necessary, metabolize proteins, lipids. In each case, the larger molecules
    are first digested into their component parts, which the cell may reassemble into
    macromolecules for its own use. Otherwise, they may be metabolized for energy by

    feeding into various parts of glycolysis or the Krebs cycle.

                                               Figure 6.8: Oxidation of different organic substrates

    Carbohydrates, fats and proteins can all be used for cellular respiration. Monomers
    of these foods enter glycolysis or the Krebs cycle at various points. Glycolysis and the
    Krebs cycle are catabolic pathways through which all kinds of food molecules are

    channelled to oxygen as their final acceptor of electrons.

    Application 6.6
    1. Explain how proteins and lipids are metabolized for energy during
        respiration
    2. Explain why the body does not use fats to produce energy as

    carbohydrates given that they produce much energy than carbohydrates.

    End of unit assessment 6
    Multiple choice questions: from question 1 to 7, choose the letter corresponding
    to the best answer.
    1. Before the Krebs cycle can proceed, pyruvic acid must be converted into
        a. Citric acid
        b. Glucose
        c. Acetyl-CoA
        d. Glucose
        e. NADH
    2. The net number of ATP made directly by glycolysis is
        a. 2
        b. 4
        c. 32
        d. 38
    3. Cellular respiration is similar to photosynthesis in that they both
        a. Produce ATP
        b. Involve chemiosmosis
        c. Make phosphoglyceraldehyde (PGAL)
        d. All of the above
    4. By accepting electrons and protons, the oxygen used in aerobic respiration
         turns into
       a. CO2
       b. H2O
       c. C6H12O6
       d. ATP
    5. The Krebs cycle occurs in the
       a. Cytosol
       b. Outer mitochondrial membrane
       c. Mitochondrial matrix
       d. Space between the inner and outer mitochondrial membrane
    6. During each turn of the Krebs cycle,
       a. Two CO2 molecules are produced
       b. Two ATP molecules are consumed
       c. Pyruvic acid combines with oxaloacetic acid
       d. Glucose combines with a four-carbon molecule.
    7. Most of the ATP synthesized in aerobic respiration is made
       a. During glycolysis
       b. Through fermentation
       c. In the cytosol

       d. Through chemiosmosis

    Structured answer questions
    8. What are the major differences between cellular respiration and
        photosynthesis?
    9. Compare aerobic respiration with anaerobic respiration or fermentation.
    10. A student set up an experiment using germinating seeds and boiled seeds

         as shown in the diagram below:

    a. State the objective of this experiment and the observation made after
         24 hours?
    b. Account for the observation made in (a) above?
    c. Suggest why vacuum flasks were used in the experiment?

    d. What was the purpose of the set-up B?

    UNIT 5 ENERGY FROM RESPIRATIONUNIT 7 EXCRETION AND OSMOREGULATION