• UNIT 16 NATURAL AND ARTIFICIAL SELECTION

    UNIT 16: NATURAL AND ARTIFICIAL SELECTION
    Key Unit Competence
    Explain the role of artificial and natural selection in the production of varieties of
    animals and plants with increased economic importance

    Learning objectives
    By the end of this unit, I should be able to:
    – Explain that natural selection occurs as populations have the capacity to
        produce many offspring that compete for resources.
    – Explain, with examples, how environmental factors can act as either stabilising,
        disruptive and directional forces of natural selection.
    – Explain how selection, the founder effect and genetic drift may affect allele
       frequencies in populations.
    – Explain how a change in allele frequency in a population can be used to
        measure evolution.
    – Describe how selective breeding (artificial selection) has been use to improve
        the milk yield of dairy cattle.
    – Outline the following examples of crop improvement by selective breeding:
    – The introduction of disease resistant varieties of wheat, tomatoes, Irish
        potatoes, and rice.
    – Inbreeding and hybridization to produce vigorous, uniform varieties of maize
    – Interpret graphs on how fur length affects the number of individuals at
       different temperatures.
    – Use the Hardy-Weinberg principle to calculate allele, genotype and phenotype
        frequencies in populations.
    – Differentiate between natural and artificial selection.
    – Appreciate that the environment has considerable influence on the expression
        of features that show continuous (or Quantitative) variation.
    – Appreciate the importance of selective breeding (artificial selection) to
        improve features in ornamental plants, crop plants, domesticated animals and

        livestock.

    Introductory activity
    Some species of plants and animals such as Dinosaurs no longer exist today
    but it is common to find new species such as lemon-orange. According to you,
    what would be the cause of some species to disappear and some new species

    to appear?

    16.1 Natural selection
    Activity 16.1
    1. Observe the graphs below, analyse and interpret them and then deduce

    different types of natural selection.

    Key: Blue line indicates a given population after natural selection while Red

    line indicates a given population before natural selection

    16.1.1 Natural selection as a means of evolution as well as capacity
    to survive and reproduce
    Throughout the lives of the individuals, their genomes interact with their
    environments to cause variations in traits from genotypic to phenotypic variations
    among the individuals in a population because of differences in their genes.
    Individuals with certain variants of the trait may survive and are capable to
    reproduce more than less successful individuals with unfavourable characters;
    therefore, the population evolves. Over time, this process can result in populations
    that specialise for particular ecological niches (microevolution) and may eventually
    result in speciation (the emergence of new species also known as macroevolution).
    In other words, natural selection is a key process to change organisms and make
    them suitable to different environment.
    The variants that are best adapted to their natural environment such as abiotic
    conditions, predation, competition to food, space, light, water and resistance
    against diseases will be selected for survival and can reproduce. By reproduction,
    organisms transmit their physical traits contained within their genes or alleles to
    their next generation. The individuals that best suited or fitted to the stated before
    environmental conditions will have the best chance to survive and produce fertile
    offspring due to characteristic features or favourable characteristics that give
    them an advantage in the struggle for existence being intraspecific or interspecific
    competition. However, those with unfavourable characteristics are more likely to
    die due to lack of resources or not having access to resources. The high or birth
    rate gives a selective advantage whereas high mortality or death rate gives them a

    selective disadvantage.

    As environmental conditions gradually change, certain characteristics within a
    population also gradually change; thus, randomly varying population are favoured,
    and natural selection occurs. This is known as the survival of the fittest. The fittest in
    evolution is defined as the ability of an organism to pass on its alleles to subsequent

    generations, compared with other individuals of the same species.

    16.1.2 Types of natural selection
    As it has been mentioned, environment is a responsible agent of natural selection.
    Thus, it selects and determines individuals in different ways according to different
    types of natural selections. Those natural selections are stabilizing selection,
    directional selection, and disruptive selection among other.

    a. Stabilising selection
    Stabilising selection is a type of natural selection in which a population mean
    stabilises on a particular non-extreme trait value as result of genetic diversity

    decreases as illustrated in the figure below.

    Figure 16.1.a: Illustration of stabilising selection

    As illustrated in the above figure, in stabilizing selection, natural selection favours
    the individuals in the population with the intermediate phenotypes. These
    individuals have greater survival and reproductive success. Individuals with extreme
    phenotypes are less adaptive and are therefore eliminated. An example is the newlyborn
    human babies who are under 2.27 Kg or over 4.54 kg are less likely to survive
    than babies weighing between 2.27 and 4.54 kg. Despite of this, with advances
    in medical science, the survival chances of newly-born underweight or overweight
    babies have now been improved.
    These individuals with extreme phenotypes have greater survival and reproductive
    success.
    b. Directional selection
    Directional selection is a mode of natural selection in which a single or new
    fit phenotype is favoured when exposed to environmental changes, causing a
    population genetic variance or allele frequency to continuously shift in one direction

    or one end of the spectrum of existing variation.

    Figure 16.1.b: Illustration of directional selection

    A classical description of directional selection has been identified in eighteenth and
    nineteenth century in England as illustrated in the figure 16.1.b above. Prior to the
    industrial revolution, the moths were predominately light in colour, which allowed
    them to blend in with the light-coloured trees and lichens in their environment. As
    soot/black powder began spewing from factories, the trees darkened and the lightcoloured
    moths became easier for predatory birds to spot.

    Over time, the frequency of the melanic form of the moth increased because their
    darker coloration provided camouflage against the sooty tree; they had a higher
    survival rate in habitats affected by air pollution. The result of this type of selection
    is a shift in the population’s genetic variance towards the new and fit phenotype.
    These individuals with extreme phenotypes have greater survival and reproductive

    success.

    c. Disruptive or diversifying selection
    In disruptive selection, both the extreme phenotypes in the population are selected
    and become more prevalent. The individuals with extreme phenotypes or endphenotypic
    spectrum have greater survival and reproductive success. The disruptive
    selection pressure increases the chances of the advantageous alleles to be passed
    on to the next generation. By disruptive selection, the intermediate phenotype is
    selected against and gradually decreases in number from generation to generation,

    and may become extinct.

                       Figure 16.1.c: Illustration of disruptive selection

    From the above figure, disruptive selection many generations may cause the
    formation of two separate gene pools and the formation of new species.
    Disruptive selection is mostly seen in many populations of animals that have
    multiple male mating strategies such as; rabbits, mice, and lobsters among others
    and is often the source of speciation or drives to speciation.
    In rabbits as illustrated in the figure 16.1.c, a hypothetical population in which
    grey and Himalayan (grey and white) rabbits are better able to blend with a rocky
    environment than white rabbits. Large dominant alpha lobster males obtain mates
    by brute force, while small males can sneak in for furtive copulations with the females
    in an alpha male’s territory. In this case, both the alpha males and the sneaking males
    will be selected for, but medium-sized males, which cannot overtake the alpha males

    and are too big to sneak copulations, are selected against.

    In scenario case of mice, those living at the beach where there is light-coloured sand
    interspersed with patches of tall grass. Light-coloured mice that blend in with the
    sand would be favoured, as well as dark-coloured mice that can hide in the grass.
    Medium-coloured mice, on the other hand, would not blend in with either the grass
    or the sand, thus, would more probably be eaten by predators. The result of this type

    of selection, is increased genetic variance as the population becomes more diverse.

    Figure: 16. 1.d: Comparison of three types of natural selection

    The three types of natural selection are summarized in the figure 16.1.d above. It
    shows populations of species which are selected by the environment particularly

    the temperature on fur colour and those which decreases to extinction.

    Application 16.1
    1. Distinguish among the different of natural selection.
    2. Describe what is meant by industrial melanism and how is beneficial to
        peppered moth
    3. Discuss how natural selection is one way of evolution and allows individual

        can survive and reproduce

    16.2 Artificial selection

    Activity 16.2
    From your daily experience and or carry out project work on plants (cabbage,
    banana, wheat, maize, tomatoes, irish potatoes, and rice) and animals (cattle
    and chicken) at your school or home. Do also research through internet and
    textbooks and then answer to the questions below:
    1. Discuss what is meant by artificial selection
    2. Distinguish between inbreeding and outbreeding selection
    3. Discuss how selective breeding or artificial selection has been used to
         improve the yield or production of plant crops such as maize, wheat,

         tomatoes, and rice as well as milk and meat

    Artificial selection is selective breeding that occurs when humans instead of
    environmental forces select and determine the desirable alleles of plants or animals
    to be passed on to successive generations. Artificial selection has been practiced
    by humans for several centuries. It has played an important role in the evolution of
    modern crop plants, farm animals and domestic pets from the wild ancestors. For
    example, farming took place about 7000 years ago. The first crops humans selected
    and domesticated include barley and wheat. By artificial selection, some scientists
    argue that artificial selection and biotechnology can combine characteristics within
    a short period of time that natural selection would require thousands or millions of
    years to carry out.
    It exerts/influences a directional selection pressure which leads to changes in the
    frequencies of alleles and genotypes which have been selected by nature in the

    population.

    16.2.1 Advantages of artificial selection

    Some of the advantages of artificial selection are:

    – It is the quickest and more certain method of producing offspring for a
        desirable characteristic.
    – It selects and breeds animals and plants that can adapt and tolerate to live in
        certain habitats or different environmental conditions such as heat, cold, day
        length, and salinity or pH changes in the soil.
    – It produces organisms that are resistant to pests, diseases or herbicides.
    – It selects and breeds crop plant such as wheat, barley, rice, and maize plants
        for high productivity or yield per unity area.
    – It selects and breeds farm animals for better quality and quantity of milk, meat
        production and wool quality.
    – It leads to plants of fast germination seeds capacity, higher growth rate, early
        maturation, better absorption of water, mineral salts or fertilizers. This allows
        the planting of the same type of crop two or three times in one season and
        therefore increases their production.
    – Animals for sports or hobbies such as horses for racing and transport; pigeons
        for flight capacity and plumage type; dogs as guardians or for hunting, racing
        and appearance; orchids, roses and other flowers to produce more colourful
       bloom; koi (a beautiful ornamental fish of striking colours-reds, golds, blues,
       yellows, metallic silvers and even greens) fish for appearance from coloured

       mutants of common food carp are produced.

    Figures 16.2 (a) Japanese Koi fish (b) Columbia livia of Europe of artificial breeding

    16.2.2 Types of artificial selection
    Inbreeding and outbreeding are the two distinguishable types of artificial selection.
    a. Inbreeding
    Inbreeding is the selective crossing between individuals that have a similar genotype
    or are more closely related than if they had been chosen at random from the entire
    population. Examples of inbreeding include; selfing in plants, mating between
    offspring with one of the parents, among siblings or closely related individuals.

    It has noticed that after several generations, the force of selection of inbreeding
    increases the frequency of homozygous genotypes. Thus, the organism is probably
    purebred, or homozygous for the selected characteristics. By inbreeding, organism
    tends to maintain the desirable characteristics such as increase the quantity and
    quality of milk by jersey cows (high cream content), produce maize plants and others
    of uniform height to facilitate mechanical harvesting, increase oil content of linseed
    oil to reduce cost of production and extraction, increase yields from plant crop and
    livestock, use less land for farming or raising livestock but increase, breading of
    horses for racing, and produce varieties of dogs for competition or as security guard
    for example.

    Even though, inbreeding is advantageous as described in above; it also presents
    disadvantages that include:
    – After several generations of excessive inbreeding, it results into inbreeding
    depression. The inbreed progeny have decreased/loss vigor resulting from
    excessive selective inbreeding between closely related organisms which
    increases homozygosity (production of individuals with harmful or undesirable
    phenotypic characteristics), poor growth and yield and decline in fertility than
    non-inbred individuals.
    – There is an increased risk of lowered diseases resistance as genetic variation is
    reduced. Thus, inbreeding is not encouraged by animal breeders.
    b. Outbreeding
    Outbreeding is the controlled mating or crossing between distantly related
    individuals (plants and animals) with desired characteristics e.g. the cross between
    Elaeis guineensis (African oil palm or macaw-fat) variety dura with Elaeis guineensis
    variety pisifera to produce the hybrid oil palm Elaeis guneesis variety tenera, with
    fruits of high oil content and do not drop off easily. They may come from two breeds
    of the same species or may come from different species. Outbreeding is more
    advantageous than inbreeding because:
    – The progeny also known as hybrids usually show more variation than
        progeny produced by inbreeding. The hybrids usually have new and superior
        phenotypes and have greater potential to adapt to environmental changes
        for example wheat, tomatoes and rice produced by outbreeding are capable
        to resist to diseases.
    – Increases heterozygosity and new opportunities for gene interaction. Harmful
        recessive alleles are masked by dominant alleles.
        However, in some cases outbreeding results in hybrid vigour; healthier; or larger
        offspring. And the hybrid produced between genetically different species are often
        sterile. They do not have sets of homologous chromosomes and meiosis cannot

        proceed to produce fertile gametes.

    Application 16.2
    1. Explain how artificial selection is beneficial to man.

    2. Distinguish between inbreeding from outbreeding.

    16.3 Allele frequency and its causes
    Activity 16.3
    Use available school resources such as internet, library, and teachers; search
    information about allele frequency, selection, the founder effect and genetic
    drift and or use pictures (a) and (b) given in question of this activity or use bean
    seeds of different colour and play a game as instructed:
       a. Take 15 bean seeds and then put all in one plastic bottle such as the one of
            mineral water or power soap
       b. Take other three empty bottles
       c. Shake the bottle containing bean seeds and randomly distribute seeds into
            the three bottles. Record and discuss the observations
       d. Repeat events in step c) at least three times.
       e. Draw the conclusion by linking the discussion to what they have read on
            allele frequency, founder effect, and genetic drift
    Then, do the following:
    1. Discuss what is meant by allele frequency
    2. Discuss how forces of mutation and natural selection affect the allele

         frequencies

    3. Analyse the figures below and then describe how the founder effect

       and genetic drift affect the allele frequencies in populations

    16.3.1 Allele frequency in a population as determinant of

    evolution

    Genetic variation which confirms evolution is determined by; mutation, natural
    selection, the founder effect, and genetic drift among others.
    a. Mutation and natural selection
    In a particular period, why do some organisms survive while others die? These
    surviving organisms generally possess traits or characteristics that bestow / give
    them traits or benefits of great value benefits that help them survive (e.g. better
    camouflage, mating, faster swimming or running, or digesting food more efficiently)
    as discussed before. Each of these characteristics is the result of a mutation or a
    change in the genetic code.
    Mutations occur spontaneously, but not all mutations are heritable; they are passed
    down to offspring only if the mutations in the gametes. These heritable mutations
    are responsible for the rise of new traits in a population. Populations or gene pools
    evolve as gene frequencies change otherwise individual organisms cannot evolve.
    Variation in populations is determined by the genes present in the population’s
    gene pool as illustrated in figure below, which may be directly altered by mutation.
    In natural selection, those individuals with superior traits will be able to compete
    and get more resources as there are more organisms than resources and produce
    more offspring. The more offspring an organism can produce, the higher its fitness.
    As novel traits and behaviours arise from mutation, natural selection preserves the

    traits that confer a benefit.

    Figure 16.3a. Mutation and natural selection

    As mutations create variation, natural selection gradually affects the frequency of
    that advantageous trait in a population.

    b. The founder effect
    The founder effect occurs when part of a population becomes isolated and
    establishes a separate gene pool with its own allele frequencies. When a small
    number of individuals become the basis of a new population, this new population
    can be very different genetically from the original population if the founders are
    not representative of the original. Therefore, many different populations, with very
    different and uniform gene pools, can all originate from the same, larger population.
    Together, the forces of natural selection, genetic drift, and founder effect can lead to

    significant changes in the gene pool of a population.

    Figure 16. 3b. three possible outcomes of the founder effect, each with gene pools separate from the

    original populations

    c. Genetic drift
    Genetic drift is an overall shift of allele distribution in an isolated population,
    due to random fluctuations in the frequencies of individual alleles of the genes.
    When selective forces are absent or relatively weak, gene frequencies tend to drift
    or change due to random events. This drift halts when the variation of the gene
    becomes “fixed” by either disappearing from the population or replacing the other
    variations completely. Even in the absence of selective forces, genetic drift can cause
    two separate populations that began with the same genetic structure to drift apart

    into the two divergent populations.


                                              Figure 16.3c. Genetic drift and gene fixation in beetles

    In the above simulation, there is fixation in the blue gene variation within five
    generations. As the surviving population changes over time, some traits (red) may
    be completely eliminated from the population, leaving only the beetles with other

    traits (blue).

    16.3.2 Allele frequency
    Natural selection affects a gene pool by increasing the frequency of alleles that give
    an advantage, and reducing the frequency of alleles that give a disadvantage. The
    allele frequency (or gene frequency) is the rate at which a specific allele appears
    within a population. In population genetics, the term evolution is defined as a
    change in the frequency of an allele in a population. Frequencies range from 0,
    present in no individuals, to 1, present in all individuals. The gene pool is the sum of
    all the alleles at all genes in an interbreeding population.

    A gene for a particular characteristic may have several variations called alleles. These
    variations code for different traits associated with that characteristic. For example,
    in the ABO blood type system in humans, three alleles (IA, IB, or i) determine the
    particular blood-type protein on the surface of red blood cells. A human with a type
    IA allele will display A-type proteins (antigens) on the surface of their red blood cells.
    Individuals with the phenotype of type A blood have the genotype IAIA or IAi, type B

    have IBIB or IBi, type AB have IAIB, and type O have ii.

    A diploid organism can only carry two alleles for a particular gene. In human blood
    type, the combinations are composed of two alleles such as IAIA or IAIB. Although each
    organism can only carry two alleles, more than those two alleles may be present
    in the larger population. For example, in a population of fifty people where all the
    blood types are represented, there may be IA alleles than i alleles. Population genetics
    is the study of how selective forces change a population through changes in alleles
    and genotypic frequencies.
    Using the ABO blood type system as an example, the frequency of one of the alleles,
    for example IA, is the number of copies of that allele divided by all the copies of the
    ABO gene in the population, i.e. all the alleles. Allele frequencies can be expressed
    as a decimal or as a percent and always add up to 1, or 100 percent, of the total
    population. For example, in a sample population of humans, the frequency of the
    IA allele might be 0.26, which would mean that 26% of the chromosomes in that
    population carry the IA allele. If we also know that the frequency of the IB allele in
    this population is 0.14, then the frequency of the i allele is 0.6, which we obtain
    by subtracting all the known allele frequencies from 1(thus: 1-0.26-0.14=0.6). A
    change in any of these allele frequencies over time would constitute evolution in

    the population.

    Application 16.3
    1. What is allele frequency?
    2. Explain how mutation and natural selection are important in gene
        frequency?
    3. In a situation where a trait is determined by two allele forms. What is
        the frequency of each allele form?

    4. Using illustrations, explain genetic drift and founder effect.

    16.4 Study of population genetic variation by Hardy-Weinberg

              principle

    Activity 16.4
    Use available school resources such as internet, library, search information
    about Hardy-Weinberg principle, allele, genotype and phenotype as well as
    allele frequency and then do the following:
    1. What is Hardy-Weinberg principle
    2. If the frequency of a recessive allele is 0.2. What is the frequency of a
         dominant allele?
    3. Cross one homozygous dominant individual of yellow colour with
        one homozygous recessive pea plant of green colour. Calculate both
        genotype, phenotype and allele frequencies by using Hardy-Weinberg

        principle if the recessive allele is equal to 0.4.

    The Hardy-Weinberg principle is a mathematical baseline way used to estimate
    the frequency of alleles, genotypes and phenotypes in a population. The principle
    assumes that in a given population, the population is large and is not experiencing
    mutation, migration, natural selection, or sexual selection.
    The Hardy- Weinberg principle states that the frequency of alleles in a population
    can be represented by P + Q = 1, with P equal to the frequency of the dominant
    allele and Q equal to the frequency of the recessive allele.
    The principle also states that the frequency of genotypes in a population is
    represented by
    p2 + 2pq + q2 = 1, with p2 equal to the frequency of homozygous dominant
    genotype, pq equal to the frequency of the heterozygous genotype, and q2 equal
    to the frequency of the Homozygous recessive genotype.
    The frequency of alleles can be estimated by calculating the frequency of the
    recessive genotype, then calculating the square root of that frequency in order to

    determine the frequency of the recessive allele.

    Figure 16.4a: Proportions of two alleles by Hardy-Weinberg principle

    By referring to the above chart, by applying the expression of Hardy-Weinberg
    principle, if the dominant allele is illustrated below as Y is equal to 0.7 while the
    recessive allele noticed as y is equal to 0.3; then by using the Hardy-Weinberg
    principle p2+2pq+q2=1, if the number of individuals is given as 500 and number
    of alleles in a gene pool is 1000; genotypic and allelic frequencies are calculated as

    illustrated follow by Y2 + 2Yy + y2 = 1 and p + q = 1 respectively:

    16.4.1 Hardy-Weinberg analysis


          Figure 16.4b: Illustration showing analysis of Hardy-Weinberg principle and calculation of allele/

          genotypes frequencies

    The Hardy-Weinberg principle states that a population’s allele and genotype
    frequencies will remain constant in the absence of evolutionary mechanisms.
    Ultimately, the Hardy-Weinberg principle models a population without evolution
    under the conditions such as; no mutations, no immigration/emigration, no natural
    selection, no sexual selection and a large population. Although there is no realworld
    population can satisfy all of these conditions, the principle stiff offers a useful
    model for population analysis.
    16.4.1 Hardy-Weinberg equations and analysis
    According to the Hardy-Weinberg principle, the variable p often represents the
    frequency of a particular allele, usually a dominant one. For example, assume that p
    represents the frequency of the dominant allele, Y, for yellow pea pods. The variable
    q represents the frequency of the recessive allele, y, for green pea pods. If p and q are
    the only two possible alleles of this characteristic, then the sum of the frequencies
    must add up to 1, or 100 percent. This can also be written as p+q=1, if the frequency
    of the Y allele in the population is 0.6, then we know that the frequency of the y
    allele is 0.4.
    From the Hardy-Weinberg principle and the known allele frequencies, we can also
    infer the frequencies of the genotypes. Since each individual carries two alleles per
    gene (Y or y), we can predict the frequencies of these genotypes with chi square. If
    two alleles are drawn at random from the gene pool, we can determine the possibility

    of each genotype.

    Application 16.4
    1. Calculate the allelic, genotypic and phenotypic frequencies:
    a. When a tall plant is crossed with a short one
    b. When a heterozygous is crossed with another heterozygous
    c. When heterozygous is crossed with a dominant homozygous. Note
         that 0.2 is given as a value of recessive allele
    2. Calculate the phenotype, genotype and allele frequencies of
        populations/ hybrids obtained when the crossing is done between YY

        and Yy individuals. Note that the dominant allele is assumed to be 0.7.

    End of unit assessment 16
    1. Differentiate between natural selection from artificial selection
    2. Some individuals of the swallowtail butterfly scientifically known as
       Papilio machaon of the family papilionidae pupate on brown stems
       or leaves; others pupate on green stems or leaves. Two distinct colour
       forms of the pupae are found, namely brown and green, with very few
       intermediates.
    a. What type of natural selection does this example show?
    b. Explain why the intermediate colour formed would be at selective
        disadvantage.
    3. Why are heavy-metal tolerant plants rare in unpolluted regions?
    4. What effect did the industrial pollution have on the frequency of the C
          (melanic) allele within a population of peppered moths.
    5. Explain what is meant by heterozygous advantage, using the sickle-cell

          allele as an example.

    UNIT 15 VARIATIONUNIT 17 EVOLUTION AND SPECIATION